STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5CCR9F-box domain containing protein. (396 aa)    
Predicted Functional Partners:
A0A2P5EYH1
Uncharacterized protein.
  
     0.521
A0A2P5CY54
Stomagen.
  
     0.518
A0A2P5FZ57
Cupredoxin.
  
     0.514
A0A2P5FK88
Uncharacterized protein.
  
     0.513
A0A2P5FZ80
Uncharacterized protein.
  
     0.506
A0A2P5C4H5
Squalene/phytoene synthase.
  
     0.489
A0A2P5BIC5
F-box domain containing protein.
  
 
   0.479
A0A2P5ESG4
Mitogen-activated protein kinase kinase kinase.
  
     0.474
A0A2P5FZ58
Phytocyanin domain containing protein.
  
 
   0.474
A0A2P5F9L8
Major latex protein domain containing protein.
  
     0.473
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.