STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5CDT3DEA(D/H)-box RNA helicase family protein. (1135 aa)    
Predicted Functional Partners:
A0A2P5EVW4
Putative ATP-dependent RNA helicase YTHDC.
  
  
 
0.895
A0A2P5APL4
DEA(D/H)-box RNA helicase family protein.
  
  
 
0.866
A0A2P5E9Q0
ATP-dependent RNA helicase DHX.
  
  
 
0.866
A0A2P5FJQ6
Uncharacterized protein.
    
 0.858
A0A2P5F7W9
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.850
A0A2P5AU06
RNA helicase, ATP-dependent DEAH box.
  
  
 
0.824
A0A2P5CWW7
Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.
    
 0.819
A0A2P5F4K3
Rhodanese-like domain containing protein.
    
 0.819
A0A2P5EWJ1
Nucleolar complex protein.
   
  0.792
A0A2P5FB56
WD repeat containing protein.
   
 0.772
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.