STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5CIT5Remorin, C-terminal. (97 aa)    
Predicted Functional Partners:
A0A2P5FAV4
Uncharacterized protein.
  
     0.527
A0A2P5B0U6
Pectin lyase fold containing protein.
  
     0.522
A0A2P5F850
Lipase_GDSL domain-containing protein.
  
     0.520
A0A2P5CT65
Prenylcysteine oxidase.
  
     0.512
A0A2P5CBN0
Respiratory burst oxidase.
  
     0.508
TorAOC2
Allene oxide cyclase.
  
     0.508
TorNAC62
NAC domain containing protein.
  
     0.506
A0A2P5DRA3
Pentatricopeptide repeat.
  
     0.505
A0A2P5EAE3
Respiratory burst oxidase.
  
     0.505
TorNAC63
NAC domain containing protein.
  
     0.505
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.