STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5CQ17FRIGIDA-like protein; Belongs to the Frigida family. (192 aa)    
Predicted Functional Partners:
A0A2P5FNZ0
Putative methyltransferase PMT.
  
 
 0.632
A0A2P5E7N5
Putative methyltransferase PMT.
  
 
 0.611
A0A2P5CX99
Methyltransferase.
  
 
   0.548
A0A2P5F1A4
Methyltransferase.
  
 
   0.544
A0A2P5F212
Protein OBERON.
  
     0.537
A0A2P5F2D9
Uncharacterized protein.
  
     0.537
A0A2P5FFF0
Protein trichome birefringence-like.
  
     0.537
A0A2P5CNR7
Methyltransferase.
  
     0.536
A0A2P5FX06
Uncharacterized protein.
  
     0.536
A0A2P5CNP7
Methyltransferase.
  
     0.535
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.