STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5CSM5Uncharacterized protein. (313 aa)    
Predicted Functional Partners:
A0A2P5CUT5
Eukaryotic translation initiation factor-like protein.
  
     0.509
A0A2P5FQG2
Actin cross-linking.
  
     0.509
A0A2P5D1F4
Uncharacterized protein.
  
     0.493
A0A2P5ER98
LOW protein: M-phase inducer phosphatase-like protein.
  
     0.493
A0A2P5EX99
Legume lectin domain containing protein; Belongs to the leguminous lectin family.
  
     0.491
A0A2P5EA49
Zein-binding domain containing protein.
  
     0.481
A0A2P5FW75
Elongation factor.
  
     0.480
TorARF4
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.479
A0A2P5C385
Uncharacterized protein.
  
     0.477
A0A2P5G0B6
Uncharacterized protein.
  
     0.477
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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