STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5CUT9Squalene/phytoene synthase; Belongs to the terpene synthase family. (363 aa)    
Predicted Functional Partners:
A0A2P5F2E8
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
     
 0.886
A0A2P5FXS6
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
     
 0.886
A0A2P5C4H5
Squalene/phytoene synthase.
     
0.885
A0A2P5AUQ9
Polyprenyl synthetase-related.
     
 0.868
A0A2P5AUX7
Polyprenyl synthetase.
     
 0.868
A0A2P5CHB4
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.864
A0A2P5F4G9
Alkyl transferase; Belongs to the UPP synthase family.
     
 0.864
A0A2P5ELB0
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
     
 0.806
A0A2P5EXQ6
Polyprenyl synthetase.
     
 0.806
A0A2P5EXR6
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
     
 0.806
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.