Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A2P5BYB1 | A0A2P5CZE9 | DEAD-box ATP-dependent RNA helicase ISE. | Methyl-CpG-binding domain-containing protein. | 0.432 |
A0A2P5BYB1 | A0A2P5E986 | DEAD-box ATP-dependent RNA helicase ISE. | Ribosomal protein. | 0.741 |
A0A2P5BYB1 | A0A2P5EUF8 | DEAD-box ATP-dependent RNA helicase ISE. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.498 |
A0A2P5CP27 | A0A2P5CZE9 | ATP-dependent RNA helicase Ski. | Methyl-CpG-binding domain-containing protein. | 0.432 |
A0A2P5CP27 | A0A2P5E986 | ATP-dependent RNA helicase Ski. | Ribosomal protein. | 0.741 |
A0A2P5CP27 | A0A2P5EUF8 | ATP-dependent RNA helicase Ski. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.498 |
A0A2P5CZE9 | A0A2P5BYB1 | Methyl-CpG-binding domain-containing protein. | DEAD-box ATP-dependent RNA helicase ISE. | 0.432 |
A0A2P5CZE9 | A0A2P5CP27 | Methyl-CpG-binding domain-containing protein. | ATP-dependent RNA helicase Ski. | 0.432 |
A0A2P5CZE9 | A0A2P5DC91 | Methyl-CpG-binding domain-containing protein. | Protein MAK16 homolog; Belongs to the MAK16 family. | 0.443 |
A0A2P5CZE9 | A0A2P5E2Z4 | Methyl-CpG-binding domain-containing protein. | ATP-dependent RNA helicase Ski. | 0.694 |
A0A2P5CZE9 | A0A2P5E6J4 | Methyl-CpG-binding domain-containing protein. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.430 |
A0A2P5CZE9 | A0A2P5E7K6 | Methyl-CpG-binding domain-containing protein. | ATP-dependent RNA helicase Ski. | 0.694 |
A0A2P5CZE9 | A0A2P5E986 | Methyl-CpG-binding domain-containing protein. | Ribosomal protein. | 0.409 |
A0A2P5CZE9 | A0A2P5EHW5 | Methyl-CpG-binding domain-containing protein. | Splicing factor-like protein. | 0.417 |
A0A2P5CZE9 | A0A2P5EQH6 | Methyl-CpG-binding domain-containing protein. | Ribosome biogenesis protein BRX. | 0.425 |
A0A2P5CZE9 | A0A2P5EUF8 | Methyl-CpG-binding domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.420 |
A0A2P5DC91 | A0A2P5CZE9 | Protein MAK16 homolog; Belongs to the MAK16 family. | Methyl-CpG-binding domain-containing protein. | 0.443 |
A0A2P5DC91 | A0A2P5E2Z4 | Protein MAK16 homolog; Belongs to the MAK16 family. | ATP-dependent RNA helicase Ski. | 0.648 |
A0A2P5DC91 | A0A2P5E6J4 | Protein MAK16 homolog; Belongs to the MAK16 family. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.992 |
A0A2P5DC91 | A0A2P5E7K6 | Protein MAK16 homolog; Belongs to the MAK16 family. | ATP-dependent RNA helicase Ski. | 0.648 |
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