STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5D296Uncharacterized protein. (81 aa)    
Predicted Functional Partners:
A0A2P5DRC4
DNA helicase, ATP-dependent.
   
 0.887
A0A2P5F968
Breast cancer type 2 susceptibility protein.
   
 0.857
A0A2P5E220
DNA recombination and repair protein.
    
 0.820
A0A2P5CC68
DNA recombination and repair protein.
   
 0.803
A0A2P5FWC4
Meiotic recombinase Dmc; Belongs to the RecA family.
   
 0.803
A0A2P5EFL4
DNA recombination and repair protein-like, ATP-binding domain containing protein.
   
 0.784
A0A2P5BQX9
DNA repair protein.
   
 0.773
A0A2P5AWA2
Donson.
  
 
 0.699
A0A2P5ED70
DNA helicase.
  
 
 0.699
A0A2P5CP01
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.685
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.