STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TorNOOT1Potassium channel. (502 aa)    
Predicted Functional Partners:
TorBZIP50
Basic-leucine zipper transcription factor.
    
 0.918
TorBZIP49
Basic-leucine zipper transcription factor.
    
 0.913
TorBZIP44
Basic-leucine zipper transcription factor.
    
 0.912
TorBZIP46
Basic-leucine zipper transcription factor.
    
 0.912
TorBZIP48
Basic-leucine zipper transcription factor.
    
 0.911
A0A2P5FLU3
Basic-leucine zipper domain containing protein.
    
 0.911
TorBZIP45
Basic-leucine zipper transcription factor.
    
 0.899
TorNPR1
Potassium channel.
     
0.881
A0A2P5EB37
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.614
TorNIN
NIN transcription factor.
   
 0.594
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.