STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5D5U1F-box domain containing protein. (491 aa)    
Predicted Functional Partners:
A0A2P5FHY4
Ovate protein family, C-terminal.
  
     0.500
A0A2P5FVZ9
Cytochrome P; Belongs to the cytochrome P450 family.
  
     0.469
A0A2P5FW09
Cytochrome P.
  
     0.457
A0A2P5D184
Ribosomal protein.
  
     0.450
A0A2P5F5Y1
Uncharacterized protein.
  
     0.448
A0A2P5F7U4
Filament-like protein.
  
     0.446
A0A2P5C281
CRIB domain containing protein.
  
     0.443
A0A2P5DUH6
Uncharacterized protein.
  
     0.439
A0A2P5C385
Uncharacterized protein.
  
     0.438
A0A2P5EXN6
Uncharacterized protein.
  
     0.434
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.