STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5D8A7Uncharacterized protein. (67 aa)    
Predicted Functional Partners:
A0A2P5DSW0
Histone chaperone domain CHZ.
    
 0.853
A0A2P5G1J6
Coiled-coil domain-containing protein.
    
 0.853
A0A2P5AD71
Sec8 exocyst complex component specific domain containing protein.
     
 0.593
A0A2P5FR53
Exocyst complex component Sec.
    
 0.562
A0A2P5F030
Exocyst complex component Sec10-like.
     
 0.558
A0A2P5F049
Exocyst complex component Sec10-like.
     
 0.558
A0A2P5FY68
Powdery mildew resistance protein, RPW8 domain containing protein.
     
 0.558
A0A2P5ERT2
Uncharacterized protein.
    
 0.495
A0A2P5BTF2
Rad9/Ddc.
   
 
 0.483
A0A2P5F6T6
Zinc-finger domain containing protein.
   
 
 0.483
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.