A0A2P5D8C8 protein (Trema orientale) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2P5D8C8

Diacylglycerol acyltransferase. (711 aa)

Predicted Functional Partners:

A0A2P5EX29

0.704

A0A2P5BBS4

0.698

A0A2P5EB37

0.688

A0A2P5END7

0.639

A0A2P5ENL4

0.639

A0A2P5AN58

0.638

A0A2P5AT52

0.638

A0A2P5BCE0

0.638

A0A2P5BN69

0.638

A0A2P5ED12

0.638

Your Current Organism:

Trema orientale

NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2P5AN58	A0A2P5BBS4	Uncharacterized protein.	Membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family.	0.874
A0A2P5AN58	A0A2P5BCE0	Uncharacterized protein.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.859
A0A2P5AN58	A0A2P5BN69	Uncharacterized protein.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.865
A0A2P5AN58	A0A2P5D8C8	Uncharacterized protein.	Diacylglycerol acyltransferase.	0.638
A0A2P5AN58	A0A2P5EB37	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.633
A0A2P5AT52	A0A2P5BBS4	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family.	0.874
A0A2P5AT52	A0A2P5BCE0	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.906
A0A2P5AT52	A0A2P5BN69	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.910
A0A2P5AT52	A0A2P5D8C8	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Diacylglycerol acyltransferase.	0.638
A0A2P5AT52	A0A2P5EB37	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.633
A0A2P5BBS4	A0A2P5AN58	Membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family.	Uncharacterized protein.	0.874
A0A2P5BBS4	A0A2P5AT52	Membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.874
A0A2P5BBS4	A0A2P5BCE0	Membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.902
A0A2P5BBS4	A0A2P5BN69	Membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family.	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.927
A0A2P5BBS4	A0A2P5D8C8	Membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family.	Diacylglycerol acyltransferase.	0.698
A0A2P5BBS4	A0A2P5EB37	Membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.940
A0A2P5BBS4	A0A2P5ED12	Membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family.	Uncharacterized protein.	0.653
A0A2P5BCE0	A0A2P5AN58	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Uncharacterized protein.	0.859
A0A2P5BCE0	A0A2P5AT52	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Glycerol-3-phosphate dehydrogenase [NAD(+)].	0.906
A0A2P5BCE0	A0A2P5BBS4	Glycerol-3-phosphate dehydrogenase [NAD(+)].	Membrane bound O-acyl transferase, MBOAT; Belongs to the membrane-bound acyltransferase family.	0.902