STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5DD47tRNA-specific 2-thiouridylase. (543 aa)    
Predicted Functional Partners:
A0A2P5A5Q7
GIDA_assoc domain-containing protein.
  
 0.856
A0A2P5DZF9
GIDA_assoc domain-containing protein.
  
 0.856
A0A2P5EHV9
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related.
  
 0.856
A0A2P5E5S5
GTP-binding protein EngA.
  
 0.852
A0A2P5EUG3
GTP-binding protein EngA.
  
 0.852
A0A2P5G1Z3
tRNA modification GTPase MnmE; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 0.852
A0A2P5ARA9
Endoplasmic reticulum vesicle transporter, C-terminal.
  
 0.824
A0A2P5ER46
Endoplasmic reticulum vesicle transporter, C-terminal.
  
 0.824
A0A2P5FRL1
DnaJ-like.
  
 0.824
A0A2P5G1T7
Endoplasmic reticulum vesicle transporter, C-terminal.
  
 0.824
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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