STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5DDL7Cupredoxin. (87 aa)    
Predicted Functional Partners:
A0A2P5ERT2
Uncharacterized protein.
   
 0.680
A0A2P5FIZ0
Ubiquitin ligase, Det1/DDB1-complexing.
  
 
  0.664
A0A2P5B3L3
Isopenicillin N synthase-like.
  
 
   0.563
A0A2P5BP71
Uncharacterized protein.
  
 
   0.562
A0A2P5FXZ4
Putative retinoblastoma binding protein (RIZ).
   
 0.554
A0A2P5B3W3
Serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.551
A0A2P5CDS3
Guanine nucleotide-binding protein, beta subunit.
    
 0.549
A0A2P5EUC2
Concanavalin A-like lectin.
    
 0.547
A0A2P5EHH6
Oxoglutarate/iron-dependent dioxygenase.
  
 
   0.544
A0A2P5DLL0
Major latex protein domain containing protein.
  
     0.539
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.