STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5DNI2LL-diaminopimelate aminotransferase. (344 aa)    
Predicted Functional Partners:
A0A2P5FZI1
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
  
 
 0.942
A0A2P5DNK3
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
  
 
 0.922
A0A2P5AUY6
Menaquinone biosynthesis protein MenD.
   
 0.905
A0A2P5DU12
Alpha/Beta hydrolase fold containing protein.
   
 0.905
A0A2P5DU14
Enolase N-terminal domain-like.
   
 0.905
A0A2P5EVZ4
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.777
A0A2P5FTR6
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.777
A0A2P5FN42
Aspartate aminotransferase.
   
 0.749
A0A2P5FFB1
Aspartate aminotransferase.
   
 0.747
A0A2P5CVA8
Histidinol-phosphate aminotransferase family.
  
 
 0.744
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.