STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TorPYL6Polyketide cyclase/dehydrase. (185 aa)    
Predicted Functional Partners:
TorPP2CA8
Protein phosphatase 2C.
    
 0.979
TorPP2CA7
Protein phosphatase 2C.
    
 0.979
TorPP2CA6
Protein phosphatase 2C.
    
 0.976
TorPP2CA4
Protein phosphatase 2C.
    
 0.927
TorPP2CA3
Protein phosphatase 2C.
    
 0.926
TorPP2CA1
Protein phosphatase 2C.
    
  0.922
TorPP2CA9
Protein phosphatase 2C.
    
 0.921
TorPP2CA5
Protein phosphatase 2C.
    
 0.919
A0A2P5E8R4
Protein phosphatase.
  
 
  0.656
TorMYB12
MYB transcription factor.
    
 
 0.588
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.