STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5DV22Glycoside hydrolase. (393 aa)    
Predicted Functional Partners:
A0A2P5EFB9
Glycoside hydrolase.
  
  
 
0.546
A0A2P5FIH5
Glycoside hydrolase.
  
  
 
0.529
A0A2P5F1R0
Glycoside hydrolase.
  
  
 
0.528
A0A2P5AW23
Glycoside hydrolase.
  
  
 
0.512
A0A2P5ERQ4
Glycoside hydrolase.
  
  
 0.482
A0A2P5DMF2
Ribosomal protein.
   
   0.459
A0A2P5C3Y9
Glycoside hydrolase.
  
  
 
0.442
A0A2P5EL00
BRISC and BRCA1-A complex member.
    
  0.428
A0A2P5EU07
Glycoside hydrolase.
  
  
 
0.421
A0A2P5BP66
Glycoside hydrolase.
  
  
 
0.404
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.