STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5E0S0Uncharacterized protein. (250 aa)    
Predicted Functional Partners:
A0A2P5ER43
Vps53-like, N-terminal.
   
 0.977
A0A2P5F081
Vps.
    
 0.977
A0A2P5DGJ5
Vacuolar protein sorting-associated protein.
   
 0.867
A0A2P5DD37
Vacuolar protein sorting-associated protein 54, N-terminal.
   
 
 0.808
A0A2P5FHD1
RINT/TIP-like.
    
 0.799
A0A2P5EY26
WD repeat containing protein.
    
 
 0.790
A0A2P5DFV4
COG complex component.
     
 0.773
A0A2P5EVZ9
Conserved oligomeric Golgi complex subunit.
     
 0.772
A0A2P5DGP6
t-SNARE; Belongs to the syntaxin family.
    
 0.760
A0A2P5EVF6
t-SNARE.
    
 0.760
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.