STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5E1Y2Oberon, PHD finger domain containing protein. (234 aa)    
Predicted Functional Partners:
A0A2P5AKE4
Ketose-bisphosphate aldolase, class-II.
  
 0.968
TorKAT2
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.881
TorKAT1
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.881
A0A2P5ER74
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.881
A0A2P5EXP2
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.881
A0A2P5FCY6
Thiolase-like protein.
  
 0.881
A0A2P5FCZ0
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.881
A0A2P5ARM8
5'(3')-deoxyribonucleotidase.
  
 0.844
A0A2P5E4K4
Cyclohexanecarboxyl-CoA dehydrogenase.
  
 0.844
TorACX4
Acyl-CoA oxidase.
  
 0.844
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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