STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5E5Q0Oxoglutarate/iron-dependent dioxygenase. (72 aa)    
Predicted Functional Partners:
A0A2P5F6L0
NAD(P)-binding domain containing protein.
   
 0.954
A0A2P5DAJ5
Cytochrome P.
     
 0.931
A0A2P5DAM5
Cytochrome P450, E-class, group I; Belongs to the cytochrome P450 family.
     
 0.931
A0A2P5FNT2
Oxoglutarate/iron-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
   
 0.917
A0A2P5CEV1
Cytochrome P450, E-class, group I; Belongs to the cytochrome P450 family.
     
 0.902
Tor4CL3
4-coumarate CoA ligase.
   
 
 0.671
Tor4CL2
4-coumarate CoA ligase.
   
 
 0.627
Tor4CL1
4-coumarate CoA ligase.
   
 
 0.627
A0A2P5C1T2
Propionate-CoA ligase.
     
 0.622
TorOPCL2
4-coumarate-CoA ligase.
     
 0.622
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.