STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5E617Coatomer beta subunit. (330 aa)    
Predicted Functional Partners:
A0A2P5E674
Peptidase.
   
 0.978
A0A2P5C4K1
Zinc finger, C2H2 domain containing protein.
    
 0.976
A0A2P5DMY5
GLE1-like.
   
 0.971
A0A2P5EJ61
Nucleoporin.
   
 0.963
A0A2P5F5G8
Peptidase S59, nucleoporin.
   
 0.948
A0A2P5FZV1
Uncharacterized protein.
   
 0.948
A0A2P5EAK1
Uncharacterized protein.
   
 0.934
A0A2P5EBD7
Nucleoporin.
   
 0.924
A0A2P5F6R1
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.898
A0A2P5DRU2
Coatomer beta subunit; Belongs to the WD repeat SEC13 family.
  
 0.882
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.