STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5E7S7Low-density lipoprotein (LDL) receptor class A repeat. (199 aa)    
Predicted Functional Partners:
A0A2P5AMI7
Glycoside hydrolase; Belongs to the glycosyl hydrolase 31 family.
   
 0.937
A0A2P5FA43
Glycoside hydrolase; Belongs to the glycosyl hydrolase 31 family.
   
 0.937
A0A2P5AAJ2
Galactose mutarotase, N-terminal barrel.
   
 0.742
A0A2P5BIN2
Glycoside hydrolase; Belongs to the glycosyl hydrolase 31 family.
   
 0.742
A0A2P5EDC3
Galactose mutarotase, N-terminal barrel.
   
 0.742
A0A2P5FDP4
Glycoside hydrolase; Belongs to the glycosyl hydrolase 31 family.
   
 0.742
A0A2P5FU26
Uncharacterized protein.
   
 0.742
A0A2P5FZP3
Glycoside hydrolase; Belongs to the glycosyl hydrolase 31 family.
   
 0.742
A0A2P5F4D1
Glycoside hydrolase.
   
 
  0.679
A0A2P5B2D4
Heat shock protein Hsp90 family.
   
 0.478
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.