STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5E9E4UBX domain-containing protein. (473 aa)    
Predicted Functional Partners:
A0A2P5FFU9
Nuclear pore localization protein Npl.
    
 0.998
A0A2P5FD06
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
    
  0.969
A0A2P5FWJ1
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
    
  0.969
A0A2P5EB40
Ubiquitin fusion degradation protein UFD.
    
 0.968
A0A2P5EG62
Ubiquitin fusion degradation protein UFD.
    
 0.968
A0A2P5FQ27
Ubiquitin fusion degradation protein UFD.
    
 0.968
A0A2P5FQ73
GAGA-binding transcriptional activator.
    
 0.968
A0A2P5EG57
UBX domain-containing protein.
    
 
 0.939
A0A2P5F0J9
UBX domain containing protein.
    
 
 0.939
A0A2P5F629
Acyl-CoA oxidase.
    
   0.913
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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