STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5EA36Uncharacterized protein. (110 aa)    
Predicted Functional Partners:
A0A2P5FL98
Solanesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.929
A0A2P5FB28
SAM-binding methyltransferase MPBQ/MBSQ; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.
     
 0.922
A0A2P5FWB7
SAM-binding methyltransferase MPBQ/MBSQ; Belongs to the class I-like SAM-binding methyltransferase superfamily. MPBQ/MBSQ MT family.
     
 0.922
A0A2P5EVZ4
4-hydroxyphenylpyruvate dioxygenase.
     
 0.918
A0A2P5FTR6
4-hydroxyphenylpyruvate dioxygenase.
     
 0.918
A0A2P5FUF5
Geranylgeranyl reductase/cyanobacteria.
     
 0.892
A0A2P5F720
Geranylgeranyl reductase/cyanobacteria.
     
 0.890
A0A2P5EA32
TRAF-like.
     
 0.788
A0A2P5G1N1
Tocopherol cyclase.
    
 0.682
A0A2P5F8A7
Sirtuin family.
    
 0.598
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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