STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TorCPK1Calcium dependent protein kinase. (574 aa)    
Predicted Functional Partners:
TorRBOH5
Respiratory burst oxidase.
   
 
 0.901
TorRBOH9
Respiratory burst oxidase.
   
 
 0.901
TorRBOH4
Respiratory burst oxidase.
   
 
 0.901
TorRBOH1
Respiratory burst oxidase.
   
 
 0.899
TorRBOH2
Respiratory burst oxidase.
   
 
 0.894
TorBSL1
Serine/threonine-protein phosphatase.
    
 0.701
A0A2P5F5V2
Parvalbumin.
   
 0.673
A0A2P5F6Z4
Parvalbumin.
   
 0.673
A0A2P5AMM1
Spastin; Belongs to the AAA ATPase family.
   
 
 0.583
A0A2P5EMS2
Cysteine-rich secretory protein, allergen V5/Tpx-1-related; Belongs to the CRISP family.
      
 0.571
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.