STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5EBY0Sequence-specific DNA binding transcription factor. (447 aa)    
Predicted Functional Partners:
A0A2P5B574
Protein YIPF.
   
 
 0.907
A0A2P5CXB3
Protein YIPF.
   
 
 0.907
A0A2P5CVT6
Golgi apparatus membrane protein TVP23; Golgi membrane protein involved in vesicular trafficking. Belongs to the TVP23 family.
   
 
 0.871
A0A2P5A3L9
Protein YIPF.
   
 
 0.620
A0A2P5ENG8
DNA-binding storekeeper protein-related transcriptional regulator.
    
 
 0.530
A0A2P5FH95
Uncharacterized protein.
  
     0.517
A0A2P5F223
Uncharacterized protein.
  
     0.506
A0A2P5FJ21
Heavy metal transport/detoxification superfamily protein.
  
     0.501
A0A2P5FHG8
Late embryogenesis abundant protein.
  
     0.499
A0A2P5FNA4
Uncharacterized protein.
  
     0.496
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.