STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5EC60Uncharacterized protein. (94 aa)    
Predicted Functional Partners:
A0A2P5BAH6
Uncharacterized protein.
  
     0.542
A0A2P5FZ26
Isopenicillin N synthase-like.
  
     0.540
A0A2P5EQ29
Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain containing protein.
  
     0.538
A0A2P5A3L8
Major facilitator, sugar transporter-like.
  
     0.536
A0A2P5EN33
Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain containing protein.
  
     0.536
A0A2P5EK40
UDP-glucuronosyl/UDP-glucosyltransferase.
  
     0.535
A0A2P5E6H9
Uncharacterized protein.
  
     0.532
A0A2P5G0X0
Peptidase S10, serine carboxypeptidase; Belongs to the peptidase S10 family.
  
     0.532
A0A2P5CQT1
Transmembrane protein.
  
     0.531
A0A2P5E5W1
UDP-glucuronosyl/UDP-glucosyltransferase.
  
     0.531
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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