STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5ECW7Proline iminopeptidase; Belongs to the peptidase S33 family. (335 aa)    
Predicted Functional Partners:
A0A2P5CJL0
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
    
  0.899
A0A2P5BRX8
Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.
    
 0.887
A0A2P5EPL1
PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related.
    
 0.740
A0A2P5FGQ3
Ornithine cyclodeaminase/mu-crystallin.
     
 0.737
A0A2P5EEU2
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.667
A0A2P5F165
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.667
A0A2P5ES73
Isochorismatase-like.
  
 0.654
TorASL
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.627
A0A2P5EI05
Peptidase M17, leucyl aminopeptidase, C-terminal.
    
 0.618
A0A2P5FNJ6
Peptidase M17, leucine aminopeptidase/peptidase B.
    
 0.618
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.