STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5ED29Amidase. (270 aa)    
Predicted Functional Partners:
GATB
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
  
 0.950
A0A2P5EMQ8
Aspartate-tRNA ligase, bacterial/mitochondrial-type.
  
 0.830
A0A2P5BHQ1
Glutamate-tRNA ligase, bacterial/mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.743
A0A2P5AKY6
Ribosomal protein.
  
 0.719
A0A2P5DRC6
Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.719
A0A2P5EL11
Glutamine-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.719
A0A2P5FN20
Ribosomal protein.
  
 0.719
A0A2P5G299
Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.719
A0A2P5EDD8
Carbamoyl-phosphate synthase, small subunit.
   
 
  0.701
A0A2P5F299
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 
  0.701
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.