STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5ED41Heat shock protein DnaJ, cysteine-rich domain containing protein. (318 aa)    
Predicted Functional Partners:
A0A2P5F6X6
Heat shock protein DnaJ, cysteine-rich domain containing protein.
  
   
 0.565
A0A2P5CCA9
Alfin.
  
     0.529
A0A2P5EVX5
Squalene/phytoene synthase.
    
 
 0.526
A0A2P5EVY5
Squalene/phytoene synthase.
    
 
 0.526
A0A2P5F6Z1
Protein kinase-like domain containing protein.
  
     0.518
A0A2P5ES92
Photosystem I PsaH, reaction centre subunit VI.
  
     0.517
A0A2P5ATG7
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
  
     0.514
A0A2P5CK05
Zinc finger, Dof-type.
  
     0.514
A0A2P5A4U8
Uncharacterized protein.
  
     0.509
A0A2P5F4E8
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
  
     0.507
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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