Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A2P5A4U8 | A0A2P5ATG7 | Uncharacterized protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.493 |
A0A2P5A4U8 | A0A2P5CCA9 | Uncharacterized protein. | Alfin. | 0.559 |
A0A2P5A4U8 | A0A2P5CK05 | Uncharacterized protein. | Zinc finger, Dof-type. | 0.535 |
A0A2P5A4U8 | A0A2P5ED41 | Uncharacterized protein. | Heat shock protein DnaJ, cysteine-rich domain containing protein. | 0.509 |
A0A2P5A4U8 | A0A2P5ES92 | Uncharacterized protein. | Photosystem I PsaH, reaction centre subunit VI. | 0.530 |
A0A2P5A4U8 | A0A2P5F4E8 | Uncharacterized protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.479 |
A0A2P5A4U8 | A0A2P5F6Z1 | Uncharacterized protein. | Protein kinase-like domain containing protein. | 0.516 |
A0A2P5ATG7 | A0A2P5A4U8 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Uncharacterized protein. | 0.493 |
A0A2P5ATG7 | A0A2P5CCA9 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Alfin. | 0.512 |
A0A2P5ATG7 | A0A2P5CK05 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Zinc finger, Dof-type. | 0.496 |
A0A2P5ATG7 | A0A2P5ED41 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Heat shock protein DnaJ, cysteine-rich domain containing protein. | 0.514 |
A0A2P5ATG7 | A0A2P5ES92 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Photosystem I PsaH, reaction centre subunit VI. | 0.961 |
A0A2P5ATG7 | A0A2P5F4E8 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.978 |
A0A2P5ATG7 | A0A2P5F6X6 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Heat shock protein DnaJ, cysteine-rich domain containing protein. | 0.427 |
A0A2P5ATG7 | A0A2P5F6Z1 | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | Protein kinase-like domain containing protein. | 0.536 |
A0A2P5CCA9 | A0A2P5A4U8 | Alfin. | Uncharacterized protein. | 0.559 |
A0A2P5CCA9 | A0A2P5ATG7 | Alfin. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.512 |
A0A2P5CCA9 | A0A2P5CK05 | Alfin. | Zinc finger, Dof-type. | 0.538 |
A0A2P5CCA9 | A0A2P5ED41 | Alfin. | Heat shock protein DnaJ, cysteine-rich domain containing protein. | 0.529 |
A0A2P5CCA9 | A0A2P5ES92 | Alfin. | Photosystem I PsaH, reaction centre subunit VI. | 0.535 |
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