STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5EHG1AWPM-19-like. (160 aa)    
Predicted Functional Partners:
A0A2P5E9V5
Mitochodrial transcription termination factor.
   
    0.519
A0A2P5EHG0
Uncharacterized protein.
      
 0.499
A0A2P5FYE2
Membrane protein.
  
     0.487
A0A2P5A5E4
Alpha/Beta hydrolase fold containing protein.
  
     0.486
A0A2P5FTX1
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.484
A0A2P5FWQ7
Phytocyanin domain containing protein.
  
    0.477
TorPIN3
Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
  
     0.460
A0A2P5EBU5
COBRA-like protein; Belongs to the COBRA family.
  
     0.457
TorZnF8
Zinc finger transcription factor.
  
     0.456
TorBZR2
BZR transcription factor.
  
     0.454
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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