STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5EI03Sin3 associated polypeptide p. (143 aa)    
Predicted Functional Partners:
A0A2P5BZG6
Nucleotide-binding alpha-beta plait domain containing protein.
   
 0.997
A0A2P5EE99
Pinin/SDK/MemA protein.
    
 0.990
A0A2P5AHD5
ARID DNA-binding domain containing protein.
   
 
 0.988
A0A2P5ETQ0
ARID DNA-binding domain containing protein.
   
 
 0.988
A0A2P5F409
ARID DNA-binding domain containing protein.
   
 
 0.988
A0A2P5F848
ARID DNA-binding domain containing protein.
   
 
 0.988
A0A2P5FD16
Splicing factor-like protein.
    
 0.968
A0A2P5BRQ6
Splicing factor-like protein.
   
 
 0.965
A0A2P5EVR1
Splicing factor-like protein.
   
 0.920
A0A2P5EZD9
Splicing factor-like protein.
   
 0.920
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.