STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5EIR6Poly(ADP-ribose) polymerase, catalytic domain containing protein. (78 aa)    
Predicted Functional Partners:
A0A2P5FE35
Histone deacetylase superfamily.
    
  0.568
A0A2P5F0W3
RING/U-box superfamily protein.
  
   0.562
A0A2P5FYU7
Uncharacterized protein.
  
 
   0.535
A0A2P5EYJ5
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
   0.530
A0A2P5E911
Origin recognition complex, subunit.
  
     0.527
A0A2P5FNF6
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
   0.526
A0A2P5DUI4
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
   0.523
A0A2P5FRC7
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
   0.520
A0A2P5EP19
Uncharacterized protein.
  
     0.518
A0A2P5EZ76
Heat shock protein DnaJ, cysteine-rich domain containing protein.
  
     0.517
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.