STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5EK21Splicing factor-like protein. (464 aa)    
Predicted Functional Partners:
A0A2P5FPK1
Guanine nucleotide-binding protein, beta subunit.
    
  0.748
A0A2P5EZX6
Histone-fold protein.
   
  0.734
A0A2P5DGK7
Transcription initiation factor.
   
 0.677
A0A2P5E0T6
Zinc finger protein.
     
 0.665
A0A2P5EDJ0
TAFII55 protein, conserved region.
    
  0.660
A0A2P5FTQ9
Splicing factor-like protein.
   
 0.660
A0A2P5FE31
Uncharacterized protein.
   
  0.654
A0A2P5FE43
Transcription initiation factor.
   
  0.654
A0A2P5ETR4
Transcription initiation factor.
    
  0.644
A0A2P5ERE3
DNA-directed RNA polymerase, alpha subunit.
    
 0.633
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.