STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5EM83Universal stress protein. (276 aa)    
Predicted Functional Partners:
A0A2P5FWF5
Cdc73/Parafibromin.
    
 0.766
A0A2P5ESM7
RNA polymerase II associated factor Paf.
   
 0.736
A0A2P5BYB1
DEAD-box ATP-dependent RNA helicase ISE.
    
 0.719
A0A2P5CP27
ATP-dependent RNA helicase Ski.
    
 0.719
A0A2P5DAM3
Leo1-like protein.
    
 0.704
A0A2P5E7U5
RNA polymerase-associated protein Ctr.
    
 0.691
A0A2P5DII6
Cytochrome c, class IA/ IB; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 0.668
A0A2P5G1B8
Translation elongation factor.
    
 0.627
A0A2P5G286
Quinoprotein alcohol dehydrogenase-like protein.
    
 0.619
A0A2P5BIC2
43kDa postsynaptic protein.
    
 0.583
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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