STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5ESY2Protohem IX farnesyltransferase. (330 aa)    
Predicted Functional Partners:
A0A2P5FLI2
Cytochrome c oxidase assembly protein CtaG/Cox.
  
 0.998
A0A2P5FYK6
COX15/CtaA family.
  
 0.998
A0A2P5FP90
TIM-barrel signal transduction protein.
   
 
 0.958
A0A2P5BHI2
Cytochrome c.
  
 0.952
A0A2P5FC03
Cytochrome c.
  
 0.952
A0A2P5DII6
Cytochrome c, class IA/ IB; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
  
 
 0.951
A0A2P5EKR0
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.940
A0A2P5FZ29
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.940
A0A2P5D9S6
Cytochrome c oxidase, subunit VIb.
    
 0.936
A0A2P5FNE5
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
    
 0.936
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.