STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5ETY4Heme oxygenase-like. (290 aa)    
Predicted Functional Partners:
A0A2P5FIN7
Ferredoxin-dependent bilin reductase.
     
 0.971
A0A2P5FZ29
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.966
A0A2P5CUD9
Frataxin.
     
 0.965
A0A2P5EKR0
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.964
A0A2P5BLC7
Heme oxygenase-like.
  
  
 
0.942
A0A2P5BAA6
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family.
  
 
 0.927
A0A2P5ESY2
Protohem IX farnesyltransferase.
     
 0.891
A0A2P5FYK6
COX15/CtaA family.
     
 0.867
A0A2P5FP90
TIM-barrel signal transduction protein.
     
 0.864
A0A2P5DEQ3
Glucose-fructose oxidoreductase, bacterial.
     
 0.686
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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