STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5EUB4Splicing factor-like protein. (692 aa)    
Predicted Functional Partners:
A0A2P5F7X2
Zinc finger, CCCH-type.
  
   
 0.495
A0A2P5EBG2
Senescence regulator.
  
     0.465
TorARF19
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.459
A0A2P5F1J9
Nucleolar protein gar2-like protein.
  
     0.456
A0A2P5FBA9
Lateral organ boundaries domain containing protein.
  
     0.444
A0A2P5B8F6
X8 domain containing protein.
  
     0.441
A0A2P5EUW1
Phytocyanin domain containing protein.
  
     0.441
A0A2P5FBD5
Lateral organ boundaries domain containing protein.
  
     0.426
A0A2P5BSP3
Allyl alcohol dehydrogenase-like protein.
  
     0.425
A0A2P5E729
Methyl-CpG DNA binding.
  
     0.425
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.