STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5EUI3Uncharacterized protein. (204 aa)    
Predicted Functional Partners:
A0A2P5AG21
TATA-box binding protein.
    
 0.698
A0A2P5AKQ1
TATA-box binding protein.
    
 0.698
A0A2P5F889
TATA-box binding protein.
    
 0.698
A0A2P5FPS9
TATA-box binding protein.
    
 0.698
A0A2P5AIJ1
Histidine triad (HIT) protein.
    
 0.689
A0A2P5C3W9
Uncharacterized protein.
    
 0.689
A0A2P5CR60
Histidine triad (HIT) protein.
    
 0.689
A0A2P5FEH8
RNA polymerase I associated factor, A49-like.
     
 0.676
A0A2P5DZI3
RNA polymerase I specific transcription initiation factor.
    
 0.671
A0A2P5FWQ3
RNA polymerase I specific transcription initiation factor.
    
 0.671
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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