STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5EV64Oxoglutarate/iron-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (282 aa)    
Predicted Functional Partners:
A0A2P5EPL1
PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related.
     
 0.577
A0A2P5FBC0
Oxoglutarate/iron-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.467
TorACO1
Oxoglutarate/iron-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.465
A0A2P5FZ23
Oxoglutarate/iron-dependent dioxygenase.
  
     0.457
A0A2P5D028
Oxoglutarate/iron-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.454
TorACO4
Oxoglutarate/iron-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.438
A0A2P5FU58
Oxoglutarate/iron-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.429
A0A2P5EZ71
Oxoglutarate/iron-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.424
A0A2P5FBC3
Oxoglutarate/iron-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.424
A0A2P5FBB8
Oxoglutarate/iron-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.416
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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