STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5EYR7Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (296 aa)    
Predicted Functional Partners:
A0A2P5F770
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.752
A0A2P5E6N5
Vacuolar protein sorting protein 26 related.
    
 
 0.665
A0A2P5FUR5
Vacuolar protein sorting protein 26 related.
    
 
 0.665
A0A2P5EV06
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.601
A0A2P5F7Z8
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.601
A0A2P5F829
Cylicin.
   
 
 0.601
A0A2P5FM67
Photosynthesis system II assembly factor Ycf48/Hcf136-like domain containing protein.
    
 0.585
A0A2P5DSR2
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
 0.523
A0A2P5EIU0
Clathrin, heavy chain.
    
 0.468
A0A2P5EM49
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.468
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.