STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5EZ63Uncharacterized protein. (524 aa)    
Predicted Functional Partners:
A0A2P5F602
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.676
A0A2P5ERE3
DNA-directed RNA polymerase, alpha subunit.
    
  0.669
A0A2P5E2Y5
Pyruvate carboxylase.
    
 0.661
A0A2P5FAZ8
Pyruvate carboxylase.
    
 0.661
A0A2P5FG00
DNA-directed RNA polymerase, subunit RPB.
    
 0.661
A0A2P5FBF2
DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site.
    
  0.660
A0A2P5EQD4
Transcription initiation factor.
    
 0.631
A0A2P5AWG8
RNA polymerase, Rpb; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
  0.583
A0A2P5BZM1
RNA polymerase, Rpb.
    
  0.583
A0A2P5DH05
RNA polymerase, Rpb.
    
  0.583
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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