STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TorBHLH20Basic helix-loop-helix transcription factor. (168 aa)    
Predicted Functional Partners:
A0A2P5EP19
Uncharacterized protein.
  
 
   0.515
A0A2P5CYR2
Lateral organ boundaries domain containing protein.
  
     0.514
A0A2P5B8Y9
Uncharacterized protein.
  
     0.513
A0A2P5DZ10
O-fucosyltransferase.
  
     0.512
A0A2P5F716
ZF-HD homeobox protein, Cys/His-rich dimerization domain containing protein.
  
     0.511
A0A2P5ENY3
Uncharacterized protein.
  
 
   0.506
A0A2P5F5H5
O-fucosyltransferase.
  
     0.504
A0A2P5DFU2
Uncharacterized protein.
  
     0.502
A0A2P5EP09
GDP-fucose protein O-fucosyltransferase.
  
 
   0.502
A0A2P5EY47
O-fucosyltransferase.
  
     0.502
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.