STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5F3Y3F-box domain containing protein. (294 aa)    
Predicted Functional Partners:
A0A2P5CUF5
Nucleic acid-binding, OB-fold containing protein.
  
 
  0.561
A0A2P5F8N4
Uncharacterized protein.
  
 
   0.536
A0A2P5FT12
Uncharacterized protein.
  
     0.535
A0A2P5EI56
Uncharacterized protein.
  
     0.532
A0A2P5ELH5
Uncharacterized protein.
  
     0.531
A0A2P5FP30
Dehydrin; Belongs to the plant dehydrin family.
  
     0.531
A0A2P5EEV7
Protein EPIDERMAL PATTERNING FACTOR.
  
     0.511
A0A2P5FR29
Protein EPIDERMAL PATTERNING FACTOR.
  
     0.511
A0A2P5EDN8
GDP-fucose protein O-fucosyltransferase.
  
     0.503
A0A2P5EZ11
Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain containing protein.
  
 
   0.502
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.