STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5F4Q3Uncharacterized protein. (756 aa)    
Predicted Functional Partners:
A0A2P5F0Y5
Protein HHL.
  
   
 0.557
A0A2P5G0W3
Glycine-rich protein.
  
     0.492
A0A2P5FFM5
N-terminal acetyltransferase A, auxiliary subunit.
      
 0.487
A0A2P5EDX0
Uncharacterized protein.
  
     0.474
A0A2P5DS47
RlpA-like double-psi beta-barrel domain containing protein.
  
     0.472
A0A2P5G0Y4
Phytosulfokine.
  
     0.468
A0A2P5FP25
Protein translocase subunit.
  
     0.459
A0A2P5DSS2
XS domain containing protein.
  
     0.452
A0A2P5AT00
Valine-tRNA ligase.
  
     0.444
A0A2P5EGB3
Uncharacterized protein.
  
     0.430
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.