STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5F5M0Cytidine deaminase, homodimeric. (188 aa)    
Predicted Functional Partners:
A0A2P5FBI6
Cytidine deaminase, homotetrameric.
   
 0.908
A0A2P5DVU2
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
 
 0.840
A0A2P5F6I6
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
  
 
 0.840
A0A2P5EC78
Inosine/uridine-preferring nucleoside hydrolase.
    
 0.704
A0A2P5EIK0
Cytidine deaminase, homodimeric.
   
 0.699
A0A2P5BUT9
3,4-dihydroxy-2-butanone 4-phosphate synthase.
    
 0.698
A0A2P5EP65
3,4-dihydroxy-2-butanone 4-phosphate synthase.
    
 0.698
A0A2P5FET6
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.695
A0A2P5F9H7
Transmembrane protein.
    
 0.690
A0A2P5FN91
Polyketide cyclase SnoaL-like domain containing protein.
    
 0.690
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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