STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5F6C5Hypoxia induced protein, domain containing protein. (82 aa)    
Predicted Functional Partners:
A0A2P5F2W6
Cytochrome c oxidase, subunit VIa; Belongs to the cytochrome c oxidase subunit 6A family.
   
 
 0.977
A0A2P5D9S6
Cytochrome c oxidase, subunit VIb.
   
 
 0.938
A0A2P5FNE5
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 
 0.938
A0A2P5ED37
Biotin carboxyl carrier protein of acetyl-CoA carboxylase.
   
 
 0.845
A0A2P5ED54
Coenzyme PQQ biosynthesis protein; Belongs to the peptidase M16 family.
   
 
 0.845
A0A2P5EUB2
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
   
 
 0.845
A0A2P5A7R2
F-box domain containing protein.
   
 
 0.827
A0A2P5C0M3
F-box domain containing protein.
   
 
 0.827
A0A2P5C0Q2
F-box domain containing protein.
   
 
 0.827
A0A2P5D0M8
F-box domain containing protein.
   
 
 0.827
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.