Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A2P5BZJ4 | A0A2P5F644 | Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Isocitrate lyase. | 0.908 |
A0A2P5BZJ4 | A0A2P5F6P7 | Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Alpha-hydroxy acid dehydrogenase, FMN-dependent. | 0.732 |
A0A2P5BZJ4 | A0A2P5F9C8 | Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.923 |
A0A2P5BZJ4 | A0A2P5FCY1 | Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Malate synthase; Belongs to the malate synthase family. | 0.906 |
A0A2P5BZJ4 | A0A2P5FIL7 | Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase. | 0.968 |
A0A2P5BZJ4 | A0A2P5FIR2 | Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Uncharacterized protein. | 0.949 |
A0A2P5BZJ4 | A0A2P5FML7 | Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | LL-diaminopimelate aminotransferase. | 0.952 |
A0A2P5CSK0 | A0A2P5DBM5 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. | 0.924 |
A0A2P5CSK0 | A0A2P5F6P7 | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | Alpha-hydroxy acid dehydrogenase, FMN-dependent. | 0.738 |
A0A2P5DBM5 | A0A2P5CSK0 | Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.924 |
A0A2P5DBM5 | A0A2P5F6P7 | Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. | Alpha-hydroxy acid dehydrogenase, FMN-dependent. | 0.759 |
A0A2P5F644 | A0A2P5BZJ4 | Isocitrate lyase. | Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.908 |
A0A2P5F644 | A0A2P5F6P7 | Isocitrate lyase. | Alpha-hydroxy acid dehydrogenase, FMN-dependent. | 0.745 |
A0A2P5F644 | A0A2P5F9C8 | Isocitrate lyase. | Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.926 |
A0A2P5F644 | A0A2P5FCY1 | Isocitrate lyase. | Malate synthase; Belongs to the malate synthase family. | 0.996 |
A0A2P5F644 | A0A2P5FIL7 | Isocitrate lyase. | Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase. | 0.973 |
A0A2P5F644 | A0A2P5FIR2 | Isocitrate lyase. | Uncharacterized protein. | 0.925 |
A0A2P5F644 | A0A2P5FML7 | Isocitrate lyase. | LL-diaminopimelate aminotransferase. | 0.956 |
A0A2P5F6P7 | A0A2P5BZJ4 | Alpha-hydroxy acid dehydrogenase, FMN-dependent. | Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.732 |
A0A2P5F6P7 | A0A2P5CSK0 | Alpha-hydroxy acid dehydrogenase, FMN-dependent. | 3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. | 0.738 |
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