STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5F7I6Small auxin-up RNA. (102 aa)    
Predicted Functional Partners:
A0A2P5FNN1
Snf1 kinase interactor-like protein.
  
     0.537
TorGPAT6
Phospholipid/glycerol acyltransferase.
  
     0.531
A0A2P5C6S0
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.
  
     0.523
A0A2P5FLR0
Protein MIZU-KUSSEI.
  
     0.522
A0A2P5EY94
Multiple chloroplast division site.
  
     0.520
TorGPAT4
Phospholipid/glycerol acyltransferase.
  
     0.518
TorPYL2
Polyketide cyclase/dehydrase.
  
     0.518
A0A2P5F4H7
Glycoside hydrolase.
  
     0.514
A0A2P5F4K0
Uncharacterized protein.
  
     0.513
A0A2P5EB61
Uncharacterized protein.
  
     0.511
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.