STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5F9I2Agenet domain containing protein. (688 aa)    
Predicted Functional Partners:
A0A2P5EF26
Spectrin beta chain, brain.
  
 
   0.563
A0A2P5BUZ4
Spectrin beta chain, brain.
  
 
   0.520
A0A2P5FI20
Pre-rRNA-processing protein IPI1/Testis-expressed sequence 10 protein.
    
 0.509
A0A2P5EFE9
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.500
A0A2P5C5L3
Uncharacterized protein.
  
     0.496
A0A2P5FUC3
IQ motif, EF-hand binding site.
  
     0.478
A0A2P5E713
Splicing factor-like protein.
  
 
   0.470
A0A2P5F838
GDSL esterase/lipase.
  
   0.468
A0A2P5FHC1
Protein LHY.
  
     0.468
A0A2P5F4P8
Serine/arginine repetitive matrix protein.
  
     0.467
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.